for about 20 bucks, you can make a power bleader that will flush your whole system in 30 seconds.
buy a power sprayer, the kind you pump up to spray weed killer or decks or what ever, ditch the sprayer and fit the hose to a barbed fitting, and tap that in to a plate large enuff to cover the front half of the MC.
clamp that on to the MC with a piece of rubber gaskit (plumbing suply cheap) with a little brake fluid in the sprayer, pump it up then crack you bleaders, it will flow continusly untill you close the bleaders., repeat for the back half.
NOTE: if you DID blead proberly and the pedel is way to soft, pull the MC with the lines atached to see if there is fluid comeing out the back of it this would indecate worn seals from excesive cylinder travel, need to replace the seals with a re build kit, or make it easy and buy a new cly