I think i would go ahead and do the whole thing. the clear coat is much more forgiving to rapair and maintain(wax and stuff)Plus if your paint thats already there is in good shape you can paint right over it. Be sure you use a good wax and grease remover and use alot of it,fisheyes suck!! just sand everything down with 400 wet or dry sandpaper (wet or dry is a brand 3M uses ) and the only kind i will use.prime any bare metal spots and start sprayin. I would call my local paint supply house and talk to those guys, I have a English Color and supply here and they rock. I would try the base clear on the doors to get the feel of it,you can buy paint by the 1/2 pint most times, you probably will have to buy a gallon of clear,but it sounds like you may need it. I love R/M paint and have used it for 10 plus years. polyester basecoat is better than urethane or enamel in my opinion (again for repairability during painting process)and cheaper. Another option is the LIMCO clear 4500 its great clear and half the cost 0f DC 5100 and you can still use a fast clear hardner.I hope im not confusin ya with all this. youll love the base clear dont be afraid to try it its easier than single stage trust me.If i can help at all just ask, I will help any way i can. Darren