The trannys the one I'm worried about most. With the converter, cooler, and lines. I'd like to do it twice on that just to get all the old out I can. Happens to be the hardest one to do

. I'm putting a drain plug in while the pans out so the second should be easier. The engine also has the cooler and lines. Do those drain all the way too. They look like they'd hold a 1/2 quart or so on thier own. The diffs and T/C I was only gonna do once.
For the tranny get a 5 gallon bucket, and have about 10 - 12 quarts of fluid sitting there with the caps already off. Have a funnel in the fill tube.
Disconnect the cooler "return" line from the cooler, and place a rubber hose or snap a metal line into the cooler and direct the line into the bucket.
Then start the vehicle in park and let it idle. Fluid will start pouring into the bucket. Immediately start pouring the new fluid into the fill tube. Continue this until either
1 - the fluid starts to come out clean
2 - the fluid starts to get air coming out with it. (shut if off right away, don't run the pump completely dry).
If you do it right you should of gotten MANY quarts through there, preferably at least 8 or 10 minimum. The fluid will slowly get cleaner the more quarts to put through it.
I do this in conjuction with also dropping the pan and changing the fluid and filter. I have done it in both orders, and don't really think it matters which one you do first. I usually do this flush first though. Then it's easier to have the correct fluid level when you are all done.
I think this is much better than even changing the fluid in the pan twice. Because the converter holds quite a bit of fluid. If you just change the pan fluid, it's only about half the fluid. Every time you change the fluid, you still have half the old fluid in there. So change it twice, still have about 1/4 of the old fluid.
Flush it all out that way and then change the fluid and filter, and you have all new fluid.