well air has to do with your air/fuel mix, loose one of the two and you have problems...
only 3 things are needed,
fuel
air
spark
couple thing to check that are easy to do,
-get a compression tester, plugs into the spark plug hole after you pull the plug. this is a easy way to tell if its a big problem.
-check your timing, a quick check with a timing light can tell you alot, some have posted thing such as maybe having your chain jump???
-fuel pressure? buy a cheap inline fuel pressure guage and install it, it help to figure out current of future problems.
-look at your vaccume lines, you just had tranny work done, were they near the hook ups on your intake? couldhave moved a line just enough to fatigue it if it was dried out,
when i mentioned the carb gasket, the thing ran great, seemed to have a power loss and made some odd noise. also on my injected jeep, when the fuel regulator was going out the jeep would pop like crazy when i reved it due to lack of fuel.
good luck, little issues are what makes us learn real quick
are you carbed, fuel injected or computer controlled carb?