There isn't any practical way to make the rods work that I have found.
It is important to support the bottom part of the bellhousing because you can only use 5 of the 6 bolts. The best thing that I have found when mixing old and new is to use a 4l80e dust cover (15765623). With that cover you will be able to use the bolts in the oil pan. The cover requires some trimming to clear the trans pan but it does work.
What flexplate are you using? That combination will require a flat flexplate and spacer from a 4l80/6.0l combination. You probably already know but just want to throw that out there for anyone else doing this swap.